Starting from an example FASTA file with proteins from P. falciparum called P-falciparum-proteins.fasta, the exercise consist in writing a script which has a function split_fasta
which has two arguments, the filename of the FASTA file as first and the path of directory as second argument.
The function should do the following:
P-falciparum-proteins.fasta which is located in the current directory ..record_id.fasta (note: replace characters like | in the record_id by _) in the current directory.After the function is executed, generate a file listing of the current directory and print out all file paths on stdout.
Example of the file listing:
A0005w-pep.fasta
A0010c-pep.fasta
A0015c-pep.fasta
A0020w-pep.fasta